Introduction to spatial sequencing data analysis

Описание к видео Introduction to spatial sequencing data analysis

I show how to find, load, and process 10x genomics visium data. But I also explain how to load in spatial data from other platforms. This is useful if you want to analyze your own spatial-seq data, or supplement your project with analysis from already published data. I do this in python using scanpy.


Notebook:
https://github.com/mousepixels/sanbom...

Reference:
Murthy et al., Nature 2022
https://www.nature.com/articles/s4158...

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