Whole Genome Sequencing of Bacterial Genomes - Tools and Applications | Basic Bioinformatics

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Explore microbiology's cutting-edge tools for unraveling bacterial genomes. Use Kmer Finder for precise species ID via whole genome sequencing. Utilize MLST to characterize strains and track evolution. Detect antibiotic resistance genes with ResFinder and identify plasmids with Plasmid Finder. Construct phylogenetic trees with CSI Phylogeny. Master these tools to identify outbreak strains and navigate microbial genomics.

Table of Contents:
- Introduction
- Kmer Finder
- Multilocus Sequence Typing
- Resistance Gene Identification
- Plasmid Finder
- CSI Phylogeny
- Practical Assignment
- Conclusion

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Whole Genome Sequencing of Bacterial Genomes - Tools and Applications | Basic Bioinformatics
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