Скачать или смотреть ENG443/543 Multicellular Modeling Lecture 8, Diffusion in CompuCell3D, February 28, 2023

ENG443/543 Computational Bioengineering Multicellular Virtual Tissue Modeling Lecture 8, February 28, 2023

Biomedical Digital Twins, Fields, Diffusion, Diffusion Solvers in CompuCell3D, Linear Gradients, Measuring Gradients, Membranes and Channels

Resources for CompuCell3D (https://compucell3d.org/Manuals).

Presented by Prof. James A. Glazier
Indiana University, Department of Intelligent Systems Engineering and Biocomplexity Institute
Bloomington, IN 47408, USA

Slides and exercises available on request.

Detailed Contents:
Biomedical Digital Twins
Student Projects Updates
Concentration Fields and Diffusion
Diffusion Equation
Field Objects in CC3D
Diffusion Solvers in CC3D
Boundary Conditions
Exercise 8.1: Diffusion with Different Initial and Boundary Conditions
Linear Gradient
Exercise 8.2: Linear Gradient, Adjusting the Display of Fields in Player
Exercise 8.3: Measuring and Plotting Gradients
Diffusion Times
Membranes as Domains with Different Diffusion Coefficients
Exercise 8.4: Creating a Permeable Membrane
Exercise 8.5: Creating a Semi-Permeable Membrane
Exercise 8.6: Creating an Ion Channel

If you found this video useful, please check out our other videos teaching computational modeling:
For dynamic network modeling:    • E340/542 Dynamic Network Modeling of Infec...  
For multicellular agent-based modeling:    • CompuCell3D Virtual Tissue Workshop 2022