Скачать или смотреть GBCC2025 Parallel Sessions 2A

Galaxy and Bioconductor Community Conference 2025
Session 2A

“From upload to execution—A unified Galaxy workflow run interface “
Ahmed H. Awan, Dannon Baker, Marius van den Beek, John Chilton, Aysam Guerler, Alireza Heidari, David Lopez, Laila Los, Michelle Savage, Bjoern Gruening, Anton Nekrutenko, Michael C. Schatz.

“More usable and more powerful Galaxy dataset collections”
John Chilton, Marius van den Beek, Ahmed Awan.

“AI-augmented data analyses in Galaxy”
Junhao Qiu, Jeremy Goecks.

“Benchmarking quantum machine learning models in Galaxy”
Bryan Raubenolt, Akhil Mohan, Kahn Rhrissorrakrai, Aritra Bose, Filippo Utro, Laxmi Parida, Ela Plow, Daniel Blankenberg.

“Leveraging deep learning with torch in R for next-generation epigenetic clock development”
Jamie Park.

“The Galaxy-ML2 tool suite—Using Galaxy to promote best practices in machine learning for biomedical data science”
Paulo Cilas Morais Lyra Junior, Junhao Qiu, Luke Sargent, Qiang Gu, Jeremy Goecks.

“NOVA—Leveraging Galaxy for neutrons scattering data analysis and visualization”
Gregory R. Watson.

“Towards the automatic integration of tools in Galaxy—The anvi’o suite and a new AI-driven automation pipeline”
Fabio Cumbo, Jayadev Joshi, Daniel Blankenberg.

“Dynamic meta-scheduling in Galaxy with TPV Broker for smarter workload distribution”
Paul De Geest, Sanjay Srikakulam, Abdulrahman Azab, Tomáš Vondrák.

“One million heart cells—Integrating public data on Galaxy to explore how cardiomyocytes change in atrial fibrillation”
Marisa J. Loach, Daniel M. Johnson, Wendi Bacon.

“gINTomics, a powerful Bioconductor package for multiomics data integration and visualization”
Angelo Velle, Francesco Patanè, Chiara Romualdi.

“Bioconductor-R-Shiny applications on Galaxy”
Pavankumar Videm, Paul Zierep, Charlotte Soneson, Federico Marini, Bjoern Gruening, Hans-Rudolf Hotz.