Скачать или смотреть BioImage Analysis in Python, Analyzing Data with Pandas

Lesson 3 of 3 in the FIJI/Jython/Python module of BioImage Analysis in Python course. Discussing basic import and export of data, manipulation of pandas dataframes, and how to add, remove and perform mathematical operations on arrays and dataframes.

There are again two Jupyter notebooks here, "Pandas intro Cambridge -- Student Copy.ipynb" and "Pandas intro Cambridge -- Instructor Copy.ipynb." As in lesson one, the student copy is to follow along with and fill in code, while the instructor copy is filled in.

At the end of the course, there is an excercise where you can build your FIJI script in Jython to detect the cells in 'simulated cells.png', export that to a csv file, and then do some data analysis on that with Pandas. That excercise is in 'Excercise_Real_Cells.ipynb' with some model answers in 'Excercise_Real_Cells_Model_Answers.ipynb'

The files for this module can be found at : https://github.com/IAFIG-RMS/Python-f...