Injustice Story Mode - Wonder Woman (W/ Added Batman)

At the start of the game, Wonder Woman is shown helping the rest of the Justice League defend Metropolis from an assault from Ares, Sinestro, Black Adam, and Doomsday. She helps Aquaman tie up Ares after the latter is defeated and is later alerted of the Joker's plan to destroy Metropolis with a nuke. As she and Hawkgirl head towards the site, she, Green Arrow, Aquaman, Green Lantern, Batman, and the Joker are teleported to the One Earth universe.

Ending up in an alternate Gotham City, Green Lantern goes to Coast City to charge his ring, Aquaman heads to Atlantis, while Wonder Woman and Green Arrow remain in Gotham. They are eventually attacked by Sinestro and are nearly killed until Green Lantern returns. When Lantern's Regime self, Yellow Lantern, shows up, he knocks out Wonder Woman briefly before Green Lantern subdues him. As they retreat, Arrow, Lantern, and Wonder Woman come across the Insurgency Batman, who takes them to the Insurgency base, where he explains he intends to use a Kryptonite weapon to incapacitate the One Earth Superman, but he needs the displaced heroes' DNA to unlock the weapon in the Batcave.

The Regime Wonder Woman is first seen talking with the Regime leader, Superman, in the Fortress of Solitude before Yellow Lantern tells him about the displaced heroes. Later after mainstream Batman is captured, she is present when Superman realizes that this Batman is one of "the duplicates".

The mainstream Wonder Woman later helps repel a Regime invasion on the Joker Clan's hideout, Arkham Asylum. She, along with Arrow, Lantern, Aquaman, and the Insurgency Batman then head to the abandoned Wayne Manor, where Wonder Woman and Arrow fight Killer Frost and Solomon Grundy. She is frozen by Frost, but is freed by Arrow, who then defeats Frost while Lantern throws Grundy into Earth's orbit. After the Kryptonite weapon is recovered in the Batcave, Wonder Woman's counterpart, as well as One Earth Black Adam, arrive. Green Arrow manages to subdue her counterpart, but mainstream Wonder Woman is knocked out by Black Adam, along with Lantern, Aquaman, and Batman. After Adam is defeated, Batman discovers that the weapon is damaged beyond repair, though the Kryptonite is intact.

Wonder Woman takes part in the invasion of Stryker's Island to rescue the mainstream Batman, but during the fight, she is choked unconscious by One Earth Superman.

After Lex Luthor is killed, the Regime Wonder Woman discusses the displaced heroes with Sinestro, Black Adam, Cyborg, Raven, and Superman, the latter of which decides to destroy Metropolis and Gotham to demonstrate the chaos that would arise in his absence. She also witnesses One Earth Shazam's murder by Superman, who then orders her to rally her Amazonian army to attack Metropolis.

When One Earth Flash informs the Insurgents of Superman's plan, One Earth Batman elects to send the displaced heroes home and rejects mainstream Batman's offer to bring over the mainstream Superman. Wonder Woman is against One Earth Batman's motives, not wanting to dishoner Lex Luthor's sacrifice. When the Regime attacks the Insurgency HQ, Wonder Woman defeats Bane before Ares transports her to Themyscara, where he reveals her counterparts intentions. After defeating One Earth Raven, Wonder Woman confronts her counterpart and tries to knock sense into her. Ultimately victorious in the fight, Wonder Woman convinces the alternate Amazons to return to their previous roles as protectors instead of conquerors, leading them in the defense of Metropolis.

In the epilogue, Wonder Woman watches on as her counterpart is taken away by her fellow Amazons.