Galaxy and Bioconductor Community Conference 2025
Keynote Speaker and Session 1
Keynote Speaker:
Sergei Pond – Professor, Department of Biology, Temple University
"Interactive Genomic Analytics with responsive notebooks, in-the-browser computation, and AI-assisted development"
Session 1
"Galaxy All-in-One Agent — A unified natural language interface for cross-Galaxy data analysis"
Junhao Qiu, Jeremy Goecks
"Introducing GalaxyMCP — Integrating AI assistants with Galaxy through the model context protocol"
Dannon Baker, Junhao Qiu, Jeremy Goecks, Mike Schatz
"Automated integration of R/Bioconductor tools into Galaxy"
Jayadev Joshi, Fabio Cumbo, Daniel Blankenberg
"User-defined, safe, and rapidly deployable Galaxy tools with embedded type-safe editing"
Marius van den Beek
"Bringing data to life — Galaxy’s new visualization framework"
Aysam Guerler, Ahmed Awan, Alireza Heidari, Bjoern Gruening, Dannon Baker, David Lopez, John Chilton, Marius van den Beek, Michelle Savage, Anton Nekrutenko, Michael C. Schatz
"Managing materials science workflows with Galaxy at STFC"
Subindev Devadasan, Leandro Liborio, Patrick Austin, Milan Kumar, Oli Finlay, Adam Bennet, Archit Bhardwaj, Kirill Fedorov, Dan Symes, Chris Armstrong, Meg Savage, Rajeev Pattathil
"Language-agnostic strategies for genomic data representation in Bioconductor"
Vincent J. Carey
"Streamlining the user experience for reproducible image analysis in Galaxy"
Leonid Kostrykin, Beatriz Serrano-Solano, Riccardo Massei, Karl Rohr
"Enabling genomic research at scale with NHGRI AnVIL — A cloud platform for genomic data analysis"
Stephen L. Mosher, Michael C. Schatz, Jonathan Lawson, Robert Carroll
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