Phylogenetics Tutorial- Download & Clean Gene Sequences With BioEdit

Описание к видео Phylogenetics Tutorial- Download & Clean Gene Sequences With BioEdit

This video walks you through the first steps of phylogenetic analysis using Sanger Sequencing products for small amplicon outputs (such as CO1, H3, 28S, etc.). This workflow is not applicable for large genomic outputs.

Timestamps:
0:00 -Downloading sequence files from Genewiz (Sanger sequencing)
3:48 -NCBI BLAST assessment of raw sequence reads
7:00 -Assess & Edit sequences using BioEdit
21:22 -Import edited sequences into MEGA and align
Note: This workflow is self-taught, and it is very possible I have done something wrong. If I have, please let me know! However, this process has worked for me so far!

The brands/programs I use are listed below: (Proceed at your own risk. This video is not sponsored or supported by these companies or any of their affiliates.)
Genewiz: Genewiz.com
NCBI Blast: blast.ncbi.nlm.nih.gov (US government website)
BioEdit: bioedit.software.informer.com
MEGA: megasoftware.net

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