ROI Analysis in FSL

Описание к видео ROI Analysis in FSL

How to create masks and do ROI analyses in FSL. Blog post about this video: https://www.andysbrainblog.com/andysb...

Link to data used in this tutorial: https://fsl.fmrib.ox.ac.uk/fslcourse/...
(Note: This will automatically start downloading the data to your computer. Make sure you have enough space (~3GB) for the files.)

Commands used: fslmaths $FSLDIR/data/standard/MNI152_T1_2mm.nii.gz -mul 0 -add 1 -roi 45 1 78 1 51 1 0 1 ACCpoint -odt float

fslmaths ACCpoint.nii.gz -kernel sphere 5 -fmean ACCsphere -odt float

fslmaths ACCsphere.nii.gz -bin ACC_bin.nii.gz

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