MGMA 10.2 Annotation of WGS and Pathway Analysis

Описание к видео MGMA 10.2 Annotation of WGS and Pathway Analysis

Nội dung bài học, slide bài giảng, bài tập: https://github.com/UeenHuynh/MGMA_2024

Nội dung bài học trong video:
0:00 Annotation of WGS and Pathway Analysis
1:58 Some comonly used genome annotation formats
4:41 Genome annotations: Structural annotations
10:00 Genome annotations: Functional annotations
13:10 Gene ontology analysis
14:50 Gene sets: Gene ontology (GO), KEGG, Reactome, MSigDB
17:21 Over representation analysis (ORA)
20:40 Gene set enrichment analysis (GSEA)
23:08 Case study
39:26 Antimicrobial resistance genes
51:43 Pathway analysis

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